Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998868.1 | Gene: | rbm26 / 407926 | XenbaseID: | XB-GENE-960053 | Length: | 626 | Species: | Xenopus tropicalis |
Alignment Length: | 788 | Identity: | 196/788 - (24%) |
---|---|---|---|
Similarity: | 300/788 - (38%) | Gaps: | 280/788 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVK----LEQASQDAREAEALAFISQEAGIAMHVPTDAKPAFDQHK-----TKDSHNQQ 186
Fly 187 SASNYQHHHVRSASP---------PGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASL 242
Fly 243 -----------------RSRSRSRSRSNERAFRRSRSRDRRVNEREKTQRQFRNKSPPGSQTDNR 290
Fly 291 HHGRRNFDRRRIGGNADDRPRFGNNKSRRSHSRSMSPERNARRNQNSPDRVQTAQANLIPAP--- 352
Fly 353 --VAPPAPVEH--------PASH--------------PRQRCRDFDEKGYCVRGETCPWDHGVNP 393
Fly 394 VVFEGINNTSLMMSMREYNPDAPEIWARSGGPPPGAGQGPVPPPTQPGQTTINPFSGNVRPTTLM 458
Fly 459 SGSGPSPMGVPNPADYARNPGAPP------QAAMMPFPFNPTAVTTPLQRQLIPI---------- 507
Fly 508 ----PVVDGAPTGGVAEVG--KRRFELEDTVAIADVPTKRKVPINSRLGPRVNPNMQQHNSSLEL 566
Fly 567 RKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAI----------VTFSTHAEANVAYRSTE 621
Fly 622 AVLNNRFIKVFWHNDSSGADVGQMNQMGGGGGGGGRKNASQYHLHNVPA-VPTP---NADGAKIS 682
Fly 683 NANPLTEA 690 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 19/82 (23%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | |||
rbm26 | NP_998868.1 | PWI | 7..72 | CDD:321990 | 41/64 (64%) |
ZnF_C3H1 | <335..355 | CDD:214632 | 13/19 (68%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 224 | 1.000 | Domainoid score | I2499 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 369 | 1.000 | Inparanoid score | I2087 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D741871at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002919 | |
OrthoInspector | 1 | 1.000 | - | - | oto105564 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3653 |
SonicParanoid | 1 | 1.000 | - | - | X1927 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.090 |