Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008770401.1 | Gene: | Rbm27 / 361317 | RGDID: | 1311966 | Length: | 1066 | Species: | Rattus norvegicus |
Alignment Length: | 1303 | Identity: | 328/1303 - (25%) |
---|---|---|---|
Similarity: | 508/1303 - (38%) | Gaps: | 477/1303 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVK---LEQASQDAREAEALAFISQEAGIAMHVPTDAKPAFDQHKTKDSHNQQSA-SNY 191
Fly 192 QHHHVRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRSRSRSNERA 256
Fly 257 FRRSRSRD--RRVNEREKTQ-RQFRN---------KSPPGSQTDNRHHGRRNF--------DRRR 301
Fly 302 IGGNADDRPRFGNNKSRRSHSRSMSPERNARRNQNSPDRVQTAQANLIPAPVAPPAPVEHPASHP 366
Fly 367 RQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSLMMSMREYNPDAPEIWARSGGPPPGAGQ 431
Fly 432 GPVPPPTQPGQTTINPFSG---NVRPTTLMSGSGPSPMGVPNPADYARNP-----GAPPQAAMMP 488
Fly 489 FPFNPTAVTT-------------------------PLQRQLI----------------------- 505
Fly 506 -------------------------------PIPVV------DG----APTGGVAEVGKRRF--- 526
Fly 527 -------------------ELEDTVAIADVPTKRKVP--INSR---------------------- 548
Fly 549 -----LGPRVNPNM---------QQHNSSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGD 599
Fly 600 PEAAIVTFSTHAEANVAYRSTEAVLNNRFIKVFWHNDS-------SGADV--GQMNQMGGGGGGG 655
Fly 656 GRKNASQYHLHNVP------------AVPT------------PNADGAKISNANPLTEAGAGNIG 696
Fly 697 TPATEQANTAAPASMRLKLNTTTAGGSAGGAAGA-GAPGSGRPLNPAANAAS------------- 747
Fly 748 ---IRKKQEEQQKAVHQLANGLRKRKQELLQSYMKQMKTALELVERMDQQDP-QRAPTLQTIKVL 808
Fly 809 QMTIDKLRKEIKADQDQLQAQMQQQQQQQQPPVKKTKEQQKKELLDMELELIAQQQEGNDTTAIQ 873
Fly 874 KRLEELQ---RNLGVGSAANNKSTHYAPASGAPGGGAGRKRPNLPEGPTRVDRRPKAIVVTGFAA 935
Fly 936 EEADFVLGHFKNFGEISKHDVDREIPQLILSYATRLNAEQAVLRGKMYKDKRLQISWAPVVTPAP 1000
Fly 1001 APMAAPVEKSAAPGDMSVSLENPKQLIQ-----SVSESESLLGSDTLPELRLEDEEEDEESEDRS 1060
Fly 1061 WRR 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 43/72 (60%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | 21/70 (30%) | ||
Rbm27 | XP_008770401.1 | PWI | 7..72 | CDD:295364 | 39/64 (61%) |
zf-CCCH | 277..299 | CDD:279036 | 12/21 (57%) | ||
RRM_RBM27 | 599..674 | CDD:240961 | 45/74 (61%) | ||
RRM_SF | 971..1013 | CDD:302621 | 21/70 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166340683 | |
Domainoid | 1 | 1.000 | 230 | 1.000 | Domainoid score | I2364 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 376 | 1.000 | Inparanoid score | I2022 |
OMA | 1 | 1.010 | - | - | QHG48662 | |
OrthoDB | 1 | 1.010 | - | - | D324834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002919 | |
OrthoInspector | 1 | 1.000 | - | - | otm46438 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR14398 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1927 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.010 |