DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctu2 and NCS2

DIOPT Version :10

Sequence 1:NP_609975.1 Gene:Ctu2 / 35234 FlyBaseID:FBgn0032793 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_014280.3 Gene:NCS2 / 855603 SGDID:S000005063 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:466 Identity:97/466 - (20%)
Similarity:183/466 - (39%) Gaps:104/466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CSKCDVNSGELYKLNFRTAE-CRECFLAYARHKFRAALGAAKILPRN--------------AEVL 83
            |.:|..::.....:..|..: |.|||:.:...|.|..:...:.. ||              :::|
Yeast     3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYF-RNLFKVIYPFEKEGSVSKIL 66

  Fly    84 LVLDGS-AESLVLLDMLHFAQTQNTFKRLHCN-------ARVVYVEEQQVQGRDPVDL---EALQ 137
            |.|..| :.|||:||::|....:.|  :.|.|       ...|:.||.....::.::.   |.:.
Yeast    67 LPLSHSDSGSLVMLDIVHDLLLEQT--KQHNNRTGFTVDVLTVFTEENVSVIKERMESLINEKMS 129

  Fly   138 RLSTQYAPFDFYVIELGALPSSLQRIKDYSPFL--NANNELIHK--------LQKLRSLTARQDY 192
            :|:.....|:.:.|::...   .....:.|.|:  |.|.|:..|        :..|:.:..:...
Yeast   130 QLNKISNIFNVHFIDVNEF---FNNASEVSTFIIDNENFEIFSKSKSVDDSNILTLKEILGKYCL 191

  Fly   193 LQQQRKNLICSVAQCLQCTHVFESNIS--------VDLATQLLTAIALGRGGSAALDVALLD--- 246
            ....|.:||..:...|.....:|:..:        ..|:..:::.:..|:|...|   ..||   
Yeast   192 NNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTKLSEVIISLVVKGKGSQIA---TFLDSES 253

  Fly   247 -DRLSG---DVKLLRPLKDLTEQEIQFYIHAQRL------------KPHFQKGSRYGMEHGETAS 295
             |.|:.   ..|.|.|:|||...||:.::..:.|            ||:.....:.....|:...
Yeast   254 FDTLNNKPCKYKNLYPMKDLLSVEIESFLQIRNLAQFLINVEETNVKPNCLIARKSLPSLGQQKL 318

  Fly   296 LQN-----LTSAFVANLQQNFASTVSTVFRTGDKIA--VNSNPEQSSCVHCRSTLDSELSDTLLA 353
            ::|     :|:.:..::|.::::.:|||.||.||:.  .:|..:.|.|..|:|.:.:..|:.|..
Yeast   319 VKNMTINEITNKYFQDIQNDYSNIISTVLRTADKLTQPKSSMAKPSQCQICQSKIYTNPSNWLNR 383

  Fly   354 I----EYSRSVSEAGVSLYKSGQD----------------LEGLAKKRLENKDG---LCHACR-A 394
            |    .|....:|... |:|..||                ::..|...|:.:||   ||:.|. .
Yeast   384 ITVTSPYPVETTEEKY-LFKQWQDSKLGQSHTHYVELLNEIKQGASNSLDVEDGDVKLCYGCLIL 447

  Fly   395 IQTELDSGNLL 405
            :.|.:...||:
Yeast   448 LNTSIKDKNLV 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctu2NP_609975.1 CTU2 295..393 CDD:463044 30/127 (24%)
NCS2NP_014280.3 CTU2 323..446 CDD:463044 30/123 (24%)

Return to query results.
Submit another query.