DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctu2 and Ctu2

DIOPT Version :10

Sequence 1:NP_609975.1 Gene:Ctu2 / 35234 FlyBaseID:FBgn0032793 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001032171.1 Gene:Ctu2 / 292069 RGDID:1562594 Length:528 Species:Rattus norvegicus


Alignment Length:500 Identity:132/500 - (26%)
Similarity:201/500 - (40%) Gaps:127/500 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCSIGEDDFGDEGAAHAMVVESLPLGIVLSPGNCSKCD-------VNSGELYKLNFRTAECRECF 58
            ||..|||..|....      |..|:........|.||.       :.:|:.:        ||:||
  Rat     1 MCQAGEDYAGPAQR------EPPPVPRPSREQKCVKCAEGLPVVVIRAGDAF--------CRDCF 51

  Fly    59 LAYARHKFRAALGAAKILPRNAEVLLVLDGSAESLVLLDMLHFAQTQNTFKRLHCNARVVYVEEQ 123
            .|:..|||||.||..:::....:|||...|...|..::..:....:|::.|||.....|:||:|.
  Rat    52 KAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEG 116

  Fly   124 QVQGRDPVD----LEALQRLSTQYAPFDFYVI---ELGALPSSLQRIKDYSP------------- 168
            ...|:...|    |..::|:... ..|.|:|:   |:.:||.|:.|.....|             
  Rat   117 AACGQSLEDRVKTLAEVKRILGN-TGFPFHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDS 180

  Fly   169 FL-------------------------------------NANNELIHKLQK-LRSLTARQDYLQQ 195
            ||                                     :|..|.:.:|.| :::|||:::.||.
  Rat   181 FLQQQHVLGTEACASPAQGQGQLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQT 245

  Fly   196 QRKNLICSVAQCLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLK 260
            .|.:|...||:......|........||.:|:|.:|||||...|.|....|:| .|||.|:||::
  Rat   246 LRTHLTVHVARSHGYRKVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDER-HGDVVLVRPMR 309

  Fly   261 DLTEQEIQFYIHAQRLKPHFQKGSRYGM----------EHGETASLQNLTSAFVANLQQNFASTV 315
            |.|.:|:.||   .||         :|:          :..|.||:..|..||:..||..|.|||
  Rat   310 DHTLKEVAFY---NRL---------FGVPSVFTPAIDTKAPEKASIHRLMEAFILKLQTLFPSTV 362

  Fly   316 STVFRTGDKI------AVNSNPEQSSCVHCRSTLDSELSDTLLAIEYSRS-------VSEAGVSL 367
            |||:||.:|:      ...:.|...:|:.|...||.:.:|:..|.....|       .:|||...
  Rat   363 STVYRTSEKLVKAPREGCATGPSGPNCLLCMCALDVDNADSATAFGAQSSSHLSQMLTAEAGTPT 427

  Fly   368 YKSGQDLEGLAKK------RLENK-----DGLCHACRAIQTELDS 401
            .......||..:.      |.|:.     :.||::||....:|.|
  Rat   428 RPCCGAGEGQTQSCHRAVGRREDAWACIIEQLCYSCRVNMKDLPS 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctu2NP_609975.1 CTU2 295..393 CDD:463044 33/121 (27%)
Ctu2NP_001032171.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/21 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..219 5/22 (23%)
TilS <254..375 CDD:439807 40/143 (28%)
CTU2 342..465 CDD:463044 17/77 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..528
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.