DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10194 and ndx-3

DIOPT Version :9

Sequence 1:NP_609973.1 Gene:CG10194 / 35231 FlyBaseID:FBgn0032790 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001380056.1 Gene:ndx-3 / 173857 WormBaseID:WBGene00003580 Length:240 Species:Caenorhabditis elegans


Alignment Length:223 Identity:49/223 - (21%)
Similarity:82/223 - (36%) Gaps:62/223 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRLLPKI----RSSSSLILLAKNQVEKSTSCDYNALLLTRTQKSTFMPESSVFPGGVCDASDSS 61
            ||.|:|.:    |.|   :||.|..:.            .|:.:.     ...||||..|..:::
 Worm    53 MSVLIPLVTVDGRDS---VLLTKRSIH------------LRSHRG-----EVCFPGGRMDPGETT 97

  Fly    62 --PAWLEHFQRNEFSAAKLRNVGHVKG--PRPDIFHTK------ADKKSL-------DPSLALRL 109
              .|..|.|:....:|..:...||:|.  .|...|:..      :|::.|       |...|:..
 Worm    98 TETALRETFEEIGVNAESVEIWGHLKSVIRRQADFNVTPIVGYISDERVLENLVVNSDEVQAVFT 162

  Fly   110 TAIRETFEELGILLCRDSKSLTSTSDYGAFYDQFDRAHWQHIVHNNA-SQFLELCKQLDVLPDVW 173
            ..|.|..::.|:...: ||.:..|      ...||...::  ||:|| :::|...::      ||
 Worm   163 IPIDELIKKAGLTKFQ-SKRMKYT------LPSFDSTEFK--VHHNAPNEYLHSTQR------VW 212

  Fly   174 S-----LHEWSVWRTPSTFKKRFETAFF 196
            .     ||:......|..:|......||
 Worm   213 GLSGVMLHQALTLLNPDVYKHDLIVKFF 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10194NP_609973.1 None
ndx-3NP_001380056.1 CoAse 54..221 CDD:239518 43/201 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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