DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tj and nrl

DIOPT Version :9

Sequence 1:NP_001260582.1 Gene:tj / 35227 FlyBaseID:FBgn0000964 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001035421.1 Gene:nrl / 554169 ZFINID:ZDB-GENE-050729-1 Length:412 Species:Danio rerio


Alignment Length:557 Identity:130/557 - (23%)
Similarity:180/557 - (32%) Gaps:220/557 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YVQEFDLHHLEVGGNGAGQSHGAGAASQVTTLGHVKREDHSPPQPVAVKW--TTIHGDPTNPDDD 74
            |:.:|||...||                         :..:||.|....:  ..:|.:.|..   
Zfish    19 YLNDFDLLKFEV-------------------------KPDTPPPPATCLYPKAGVHAEMTGS--- 55

  Fly    75 PDSLPLSGPEPAGAVEVSPSPHIKLRSFSGHHQWHMDERRLQPLSPPPEQYGPLPGQA------- 132
                |.: |.|.....:|.||:..|                 |.||.... ||.|..|       
Zfish    56 ----PFA-PRPPADSSLSSSPYTSL-----------------PPSPTLSD-GPPPASASSSSSSL 97

  Fly   133 ---ILVNTSSGAGVPGGVPSTPPETPPVVGSPTGSSSCPAQT----------YAHHYARTPGSSV 184
               :.::|...:|...|...|...:|...|.|   :.||..|          ....:....|.:.
Zfish    98 SFPLSISTGYISGQSSGSQGTLDGSPSAAGGP---APCPNATSLEDLLWLAALQQQFGGEAGGAA 159

  Fly   185 SVSA----------------------------SAAAAAAASAGAASVSAGLSHDMMWLTNSIRAD 221
            |:..                            |||||..:.....|.|:..|| |...::...||
Zfish   160 SLLGALGGVPERGDRDQRGFLGCEDAVEALLNSAAAAVTSQFPVLSQSSSSSH-MGDSSSDSSAD 223

  Fly   222 ---QQPLDL--RPLPYPGSQEEAEEWDRQRDYALQAAAAHHHHHGQPL--MQAQHHPHGHGGHPH 279
               .:|.|:  ||:....|...          :|.........:.|||  ....||||    ||.
Zfish   224 VVLNKPSDMCHRPILVVSSNPS----------SLANVNPSAGPYAQPLSPQSRLHHPH----HPM 274

  Fly   280 QVMLQQSKYPHHHHHHFHNLELTPINMHSNSYGSASGALTPTCLPQVPSNGSGSSGGGGGSGSGS 344
            |        .||||||.|:                        |.||...|              
Zfish   275 Q--------GHHHHHHHHH------------------------LLQVAQCG-------------- 293

  Fly   345 GGPGSVGGGSCVITRAALQPCRPLSASSTRSSNNMSPRTCSGAYSNATLEDCLNDDMLTTLTVRE 409
                                                            :|:..:|:.|.:|:|||
Zfish   294 ------------------------------------------------VEERFSDEQLVSLSVRE 310

  Fly   410 LNKRLHGCPREEVVRLKQKRRTLKNRGYAQNCRSKRLHQRHELEKANRVLNQDLHRLKLEYSRVC 474
            ||:.|.|..::|||||||||||||||||||:||.|||..||.||....:|.|.|.:|:.|.|||.
Zfish   311 LNRHLRGVSKDEVVRLKQKRRTLKNRGYAQSCRYKRLQHRHALESEKHILTQQLEQLQCELSRVL 375

  Fly   475 QERDALMQRLQRAANGGVGAGGATAGGDSQSSPEFYL 511
            :|||....|.::..:.............|.:.|:::|
Zfish   376 RERDTYKARYEKLISSSERQPSHPNTSPSPTPPDYFL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tjNP_001260582.1 bZIP_Maf 397..486 CDD:281170 50/88 (57%)
coiled coil 419..486 CDD:269866 40/66 (61%)
nrlNP_001035421.1 Maf_N 136..191 CDD:285569 3/54 (6%)
bZIP_Maf_large 320..389 CDD:269866 40/68 (59%)
coiled coil 320..389 CDD:269866 40/68 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576601
Domainoid 1 1.000 104 1.000 Domainoid score I6631
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 154 1.000 Inparanoid score I4286
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1395389at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10129
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X543
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.000

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