DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10026 and AT1G30690

DIOPT Version :9

Sequence 1:NP_609968.3 Gene:CG10026 / 35226 FlyBaseID:FBgn0032785 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001031119.1 Gene:AT1G30690 / 839949 AraportID:AT1G30690 Length:540 Species:Arabidopsis thaliana


Alignment Length:282 Identity:69/282 - (24%)
Similarity:110/282 - (39%) Gaps:73/282 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TEEEVPEHIRRLAQEQGECPSSKDKVIEQFRNYILEHNECQPHRSDAKYLEKFLRARYWKIENSY 84
            ||:.|.|.::....|..:...|.||.||.:...:|.....:   |....|.||||||.:|:..::
plant   177 TEDVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAE---STDVILLKFLRARDFKVNEAF 238

  Fly    85 KLLCSYYRFREQNK-------SFYEKVRPLDLRHVG----------------QSDILTVTPYRDQ 126
            ::|....::|:|||       .|.|     ||....                .|:.|..|...::
plant   239 EMLKKTLKWRKQNKIDSILGEEFGE-----DLATAAYMNGVDRESHPVCYNVHSEELYQTIGSEK 298

  Fly   127 HGHRILIYRFGLWRPNQVTVDDIFRATIVLQELGSLEPISQIVGGV----GIFDLKDLGLEHILH 187
            :..:.|.:||.|....             :|:| :|:|     |||    .|.|||:        
plant   299 NREKFLRWRFQLMEKG-------------IQKL-NLKP-----GGVTSLLQIHDLKN-------- 336

  Fly   188 LSPSVA--------QKMIALLVTSMPIRTSALHIVNQNWVFNAAFKIFKPFLNAAMREKLYI--H 242
             :|.|:        :|:|..|..:.|...|....:|..:.|.|...:..|||....:.|..:  .
plant   337 -APGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPFLTQRTKSKFVVARP 400

  Fly   243 GSDMTSLHKHINPEHLPKRYGG 264
            .....:|.|:|..:.||.:|||
plant   401 AKVRETLLKYIPADELPVQYGG 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10026NP_609968.3 CRAL_TRIO_N 43..90 CDD:215024 15/46 (33%)
SEC14 112..265 CDD:238099 40/183 (22%)
AT1G30690NP_001031119.1 CRAL_TRIO_N <219..244 CDD:215024 9/24 (38%)
SEC14 273..422 CDD:214706 38/176 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 50 1.000 Domainoid score I4355
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1182715at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.