DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10026 and Ttpa

DIOPT Version :9

Sequence 1:NP_609968.3 Gene:CG10026 / 35226 FlyBaseID:FBgn0032785 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_037180.1 Gene:Ttpa / 25571 RGDID:3915 Length:278 Species:Rattus norvegicus


Alignment Length:306 Identity:93/306 - (30%)
Similarity:151/306 - (49%) Gaps:53/306 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RTMPTIEHKLNITEEEVPEH----------IRRLAQEQG--ECPSSKDKVIEQFRNYILEHNECQ 60
            |..|.:..:||    |.|:|          :||.|||:|  |.|                    |
  Rat     5 RPGPVVGKQLN----EQPDHSPLVQPGLAELRRRAQEEGVPETP--------------------Q 45

  Fly    61 PHRSDAKYLEKFLRARYWKIENSYKLLCSYYRFREQNKSFYEKVRP---LDLRHVGQSDILTVTP 122
            | .:|| :|.:|||||.:.::.:::|:.:||::|.:.......:.|   |.|...|...:|.   
  Rat    46 P-LTDA-FLLRFLRARDFDLDLAWRLMKNYYKWRAECPELSADLHPRSILGLLKAGYHGVLR--- 105

  Fly   123 YRDQHGHRILIYRFGLWRPNQVTVDDIFRATIVLQELGSLEPISQIVGGVGIFDLKDLGLEHILH 187
            .||..|.|:||||...|.|...|..|:||.:::..||...|..:|..|...||||:...:.|...
  Rat   106 SRDPTGSRVLIYRISYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQISHAFQ 170

  Fly   188 LSPSVAQKMIALLVTSMPIRTSALHIVNQNWVFNAAFKIFKPFLNAAMREKLYIHGSD-MTSLHK 251
            ::||||:|:.|::..|.|::...:|::|:..:|:|.|.:.||||...::.::::||:: .:||.:
  Rat   171 ITPSVAKKIAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLHGNNYKSSLLQ 235

  Fly   252 HINPEHLPKRYGGLHEDYSYTLWLDMLKEQCSGNSIQKDMEQLGFI 297
            |. |:.||..|||......     |:.:|..  |.|.|..:.|..|
  Rat   236 HF-PDILPLEYGGNESSME-----DICQEWT--NFIMKSEDYLSSI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10026NP_609968.3 CRAL_TRIO_N 43..90 CDD:215024 11/46 (24%)
SEC14 112..265 CDD:238099 53/153 (35%)
TtpaNP_037180.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 7/20 (35%)
CRAL_TRIO_N 25..73 CDD:215024 19/69 (28%)
CRAL_TRIO 99..248 CDD:395525 53/152 (35%)
Phosphatidylinositol 3,4-bisphosphate binding. /evidence=ECO:0000250|UniProtKB:Q8BWP5 190..192 0/1 (0%)
Phosphatidylinositol 4,5-bisphosphate binding. /evidence=ECO:0000250|UniProtKB:Q8BWP5 208..211 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340646
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 1 1.000 - - FOG0000233
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.