DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10026 and cgr-1

DIOPT Version :9

Sequence 1:NP_609968.3 Gene:CG10026 / 35226 FlyBaseID:FBgn0032785 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_508618.2 Gene:cgr-1 / 180650 WormBaseID:WBGene00020847 Length:383 Species:Caenorhabditis elegans


Alignment Length:102 Identity:23/102 - (22%)
Similarity:48/102 - (47%) Gaps:3/102 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 VGGVGIFDLKDLGLEHILHLSPSVAQKMIALLVTSMPIRTSALHIVNQNWVFNAAFKIFKPFLNA 233
            :|.:.|.||....::.:...:..|...::.:|....|.....::|:|...:.:|.:.:..|.|::
 Worm   161 MGVIIIMDLDGFSMDLLYTPTLKVYMSLLTMLQNIFPDFARRIYIINCPAMMSAVYAMVSPVLSS 225

  Fly   234 AMREKLYIHGSDMTS-LHKHINPEHLPKRYGGL--HE 267
            ..|||:.....|..: |.:.|..|::...:||:  ||
 Worm   226 QTREKVRFLDKDWKNHLIEEIGEENIFMHWGGVKKHE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10026NP_609968.3 CRAL_TRIO_N 43..90 CDD:215024
SEC14 112..265 CDD:238099 20/96 (21%)
cgr-1NP_508618.2 SEC14 91..257 CDD:214706 19/95 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.