DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10026 and F18A11.2

DIOPT Version :9

Sequence 1:NP_609968.3 Gene:CG10026 / 35226 FlyBaseID:FBgn0032785 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_496771.1 Gene:F18A11.2 / 174945 WormBaseID:WBGene00008929 Length:388 Species:Caenorhabditis elegans


Alignment Length:259 Identity:57/259 - (22%)
Similarity:95/259 - (36%) Gaps:61/259 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AKYLEKFLRARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHR 130
            ||.|::.|..|.....|||.   |.....|...:.|.   |:|:  :||:         .|..::
 Worm    47 AKALKRHLNIRKTIDLNSYS---SKTELEEDELNKYV---PIDV--IGQN---------HQDDNK 94

  Fly   131 ILIYRFGLWRPNQV----TVDDIFRATIVLQELGSLEPISQIV-----------GGVGIFDLKDL 180
            :|::.    |..::    .||::.....:..:|..:|.:.|.|           ||:.|.||..:
 Worm    95 VLMFE----RTGKIDISGLVDNVLMHKFMQIKLKMMEGVHQKVVAAERKTGRQSGGLFIMDLDGI 155

  Fly   181 GLEHILHLSPSVAQKMIALLVTSMPIRTSALH-----------IVNQNWVFNAAFKIFKPFLNAA 234
                      |.:.|:|::|.....|....|.           |||.....|...:...|||...
 Worm   156 ----------SFSPKLISVLTGPYRIMWGTLFDHYPQLLQKIIIVNAPSFVNVLHQACSPFLPED 210

  Fly   235 MREKLYIHGSD-MTSLHKHINPEHLPKRYGGLHEDYSYTLWLDMLKEQCSGNSIQKDMEQLGFI 297
            .:||:.|.... :.::.||.:...||...||   |...|..|.|..........:|:.|::..:
 Worm   211 YKEKIVITSEPAIGAIQKHADKCFLPSDLGG---DLEKTTSLPMAPFPKMNKKYEKEKEKVSLL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10026NP_609968.3 CRAL_TRIO_N 43..90 CDD:215024 8/23 (35%)
SEC14 112..265 CDD:238099 37/179 (21%)
F18A11.2NP_496771.1 SEC14 72..244 CDD:214706 43/202 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.