DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10026 and clvs2

DIOPT Version :10

Sequence 1:NP_609968.3 Gene:CG10026 / 35226 FlyBaseID:FBgn0032785 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_017949794.1 Gene:clvs2 / 100496225 XenbaseID:XB-GENE-1005080 Length:327 Species:Xenopus tropicalis


Alignment Length:252 Identity:71/252 - (28%)
Similarity:129/252 - (51%) Gaps:2/252 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PEHIRRLAQEQGECPSSKDKVIEQFRNYILEHNECQPHRSDAKYLEKFLRARYWKIENSYKLLCS 89
            ||.:.:...|..|.|.:..:.|::.|:.::...:....|:|..::.:|||||.:....:::||..
 Frog    10 PETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLLAQ 74

  Fly    90 YYRFREQNKSFYEKVRPLD--LRHVGQSDILTVTPYRDQHGHRILIYRFGLWRPNQVTVDDIFRA 152
            |:.:|:||...::..:..|  ::...:.....|....|..|.:||:.....|..::.|:.||.||
 Frog    75 YFEYRQQNLDMFKNFKATDPGIKQGLKDGFPGVLSNLDHFGRKILVLFAANWDQSRYTLVDILRA 139

  Fly   153 TIVLQELGSLEPISQIVGGVGIFDLKDLGLEHILHLSPSVAQKMIALLVTSMPIRTSALHIVNQN 217
            .::..|....:|..|:.|.|.|.|..:...:....|:||:.:..|..|..|.|.|...:|.|||.
 Frog   140 ILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQP 204

  Fly   218 WVFNAAFKIFKPFLNAAMREKLYIHGSDMTSLHKHINPEHLPKRYGGLHEDYSYTLW 274
            |..:|.:.:.:|||....|:::::||:::.|||:.|:||.||..:||:...|....|
 Frog   205 WYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEILPSEFGGMLPPYDMGTW 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10026NP_609968.3 CRAL_TRIO_N 43..90 CDD:215024 11/46 (24%)
SEC14 117..265 CDD:469559 47/147 (32%)
clvs2XP_017949794.1 CRAL_TRIO_N 29..75 CDD:215024 11/45 (24%)
SEC14 101..251 CDD:469559 46/149 (31%)

Return to query results.
Submit another query.