Sequence 1: | NP_001260578.1 | Gene: | RanGAP / 35223 | FlyBaseID: | FBgn0003346 | Length: | 596 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001318597.1 | Gene: | RANGAP2 / 832052 | AraportID: | AT5G19320 | Length: | 545 | Species: | Arabidopsis thaliana |
Alignment Length: | 430 | Identity: | 110/430 - (25%) |
---|---|---|---|
Similarity: | 166/430 - (38%) | Gaps: | 92/430 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 AADVQDVVDAL----NKQTTVHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISE 91
Fly 92 IPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGS 156
Fly 157 MLSRALID------LHANANKAG-------------FPLQLRVFIGSRNRLEDAGATEMATAFQT 202
Fly 203 LKTFEEIVLEQNSIYIEGVEALAE---SFKHNPHL--------------------------RVLN 238
Fly 239 MNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINS 303
Fly 304 DGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLP-TAAALQPFQHQEEEDLEDEYQA 367
Fly 368 DKQDADYEEEEEVHEHANDTTEEADEDSEGDEDDEEDEGD 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RanGAP | NP_001260578.1 | leucine-rich repeat | 45..77 | CDD:275380 | 6/31 (19%) |
LRR_RI | 50..337 | CDD:238064 | 87/334 (26%) | ||
leucine-rich repeat | 78..109 | CDD:275380 | 7/30 (23%) | ||
leucine-rich repeat | 110..139 | CDD:275380 | 14/28 (50%) | ||
leucine-rich repeat | 140..167 | CDD:275380 | 9/32 (28%) | ||
leucine-rich repeat | 178..205 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 206..233 | CDD:275380 | 9/29 (31%) | ||
leucine-rich repeat | 234..261 | CDD:275380 | 9/52 (17%) | ||
leucine-rich repeat | 262..290 | CDD:275380 | 5/27 (19%) | ||
RANGAP2 | NP_001318597.1 | WPP | 13..109 | CDD:404775 | |
LRR_RI | 183..450 | CDD:423007 | 68/271 (25%) | ||
leucine-rich repeat | 216..243 | CDD:275380 | 14/28 (50%) | ||
leucine-rich repeat | 244..271 | CDD:275380 | 8/26 (31%) | ||
leucine-rich repeat | 272..295 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 300..327 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 328..355 | CDD:275380 | 7/26 (27%) | ||
leucine-rich repeat | 356..379 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 385..408 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 413..441 | CDD:275380 | 5/27 (19%) | ||
leucine-rich repeat | 442..462 | CDD:275380 | 7/19 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5238 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I2094 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1357476at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm3162 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2301 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.870 |