| Sequence 1: | NP_001260578.1 | Gene: | RanGAP / 35223 | FlyBaseID: | FBgn0003346 | Length: | 596 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001190166.1 | Gene: | RANGAP1 / 825488 | AraportID: | AT3G63130 | Length: | 535 | Species: | Arabidopsis thaliana |
| Alignment Length: | 408 | Identity: | 111/408 - (27%) |
|---|---|---|---|
| Similarity: | 177/408 - (43%) | Gaps: | 62/408 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 34 VQDVVDALNKQTTVHYLNLDGNTLGVEAAKAIGEGLKR-HPEFRKALWKNMFTGRLISEIPEALK 97
Fly 98 HLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRAL 162
Fly 163 IDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAES 227
Fly 228 FKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLE 292
Fly 293 VIDLGFNEI--NSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAALQPFQH 355
Fly 356 QEEEDL-------------------EDEYQADKQDADYEEEEEVHEHANDTTEEA--------DE 393
Fly 394 DSEG---DEDDEEDEGDE 408 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RanGAP | NP_001260578.1 | leucine-rich repeat | 45..77 | CDD:275380 | 8/32 (25%) |
| LRR_RI | 50..337 | CDD:238064 | 88/289 (30%) | ||
| leucine-rich repeat | 78..109 | CDD:275380 | 7/30 (23%) | ||
| leucine-rich repeat | 110..139 | CDD:275380 | 13/28 (46%) | ||
| leucine-rich repeat | 140..167 | CDD:275380 | 9/26 (35%) | ||
| leucine-rich repeat | 178..205 | CDD:275380 | 8/26 (31%) | ||
| leucine-rich repeat | 206..233 | CDD:275380 | 9/26 (35%) | ||
| leucine-rich repeat | 234..261 | CDD:275380 | 9/26 (35%) | ||
| leucine-rich repeat | 262..290 | CDD:275380 | 6/27 (22%) | ||
| RANGAP1 | NP_001190166.1 | WPP | 14..110 | CDD:404775 | |
| LRR_RI | 133..446 | CDD:423007 | 97/334 (29%) | ||
| leucine-rich repeat | 211..234 | CDD:275380 | 12/22 (55%) | ||
| leucine-rich repeat | 239..259 | CDD:275380 | 8/23 (35%) | ||
| leucine-rich repeat | 260..294 | CDD:275380 | 10/39 (26%) | ||
| leucine-rich repeat | 295..322 | CDD:275380 | 9/26 (35%) | ||
| leucine-rich repeat | 323..350 | CDD:275380 | 9/26 (35%) | ||
| leucine-rich repeat | 351..379 | CDD:275380 | 6/27 (22%) | ||
| leucine-rich repeat | 380..407 | CDD:275380 | 10/28 (36%) | ||
| leucine-rich repeat | 408..435 | CDD:275380 | 10/35 (29%) | ||
| leucine-rich repeat | 436..455 | CDD:275380 | 3/18 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5238 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I2094 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1357476at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | otm3162 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103239 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2301 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 8 | 7.770 | |||||