| Sequence 1: | NP_001260578.1 | Gene: | RanGAP / 35223 | FlyBaseID: | FBgn0003346 | Length: | 596 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006242162.1 | Gene: | Rangap1 / 362965 | RGDID: | 1310380 | Length: | 634 | Species: | Rattus norvegicus |
| Alignment Length: | 591 | Identity: | 209/591 - (35%) |
|---|---|---|---|
| Similarity: | 304/591 - (51%) | Gaps: | 75/591 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSTFNFASMAAQLGQEQ----GISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNTLGVEA 61
Fly 62 AKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMR 126
Fly 127 GLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDA 191
Fly 192 GATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEAL 256
Fly 257 PFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRI 321
Fly 322 LNLDGNSFGEEGSEKIISEMSKLPTAAALQPFQHQEEEDLEDEYQADKQDADYEEEEEVHEHAND 386
Fly 387 TTEEADEDSEGDEDDEEDEGDEEYSNVAE-------ETAYVTTNAYTTKLFNDTTNSMASETFAV 444
Fly 445 ANKT----ISQKCT--PEKF--------------------------CLSQKPCSQEDFDS----- 472
Fly 473 --------LDMDNKLEALQSIVNQFTGDNHL------------LLLVFTTLKCAHLSQSSKAALD 517
Fly 518 LAVSLY 523 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RanGAP | NP_001260578.1 | leucine-rich repeat | 45..77 | CDD:275380 | 12/31 (39%) |
| LRR_RI | 50..337 | CDD:238064 | 139/286 (49%) | ||
| leucine-rich repeat | 78..109 | CDD:275380 | 19/30 (63%) | ||
| leucine-rich repeat | 110..139 | CDD:275380 | 19/28 (68%) | ||
| leucine-rich repeat | 140..167 | CDD:275380 | 14/26 (54%) | ||
| leucine-rich repeat | 178..205 | CDD:275380 | 14/26 (54%) | ||
| leucine-rich repeat | 206..233 | CDD:275380 | 12/26 (46%) | ||
| leucine-rich repeat | 234..261 | CDD:275380 | 13/26 (50%) | ||
| leucine-rich repeat | 262..290 | CDD:275380 | 9/27 (33%) | ||
| Rangap1 | XP_006242162.1 | LRR_RI | 69..406 | CDD:238064 | 151/336 (45%) |
| leucine-rich repeat | 99..129 | CDD:275380 | 12/29 (41%) | ||
| leucine-rich repeat | 130..161 | CDD:275380 | 19/30 (63%) | ||
| leucine-rich repeat | 162..191 | CDD:275380 | 19/28 (68%) | ||
| leucine-rich repeat | 192..219 | CDD:275380 | 14/26 (54%) | ||
| leucine-rich repeat | 230..257 | CDD:275380 | 14/26 (54%) | ||
| leucine-rich repeat | 258..285 | CDD:275380 | 12/26 (46%) | ||
| leucine-rich repeat | 286..313 | CDD:275380 | 13/26 (50%) | ||
| leucine-rich repeat | 314..342 | CDD:275380 | 9/27 (33%) | ||
| RanGAP1_C | 453..632 | CDD:285120 | 32/178 (18%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166353744 | |
| Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6722 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5238 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 320 | 1.000 | Inparanoid score | I2447 |
| OMA | 1 | 1.010 | - | - | QHG52895 | |
| OrthoDB | 1 | 1.010 | - | - | D1357476at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004671 | |
| OrthoInspector | 1 | 1.000 | - | - | oto98615 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103239 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24113 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2301 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.770 | |||||