| Sequence 1: | NP_001260578.1 | Gene: | RanGAP / 35223 | FlyBaseID: | FBgn0003346 | Length: | 596 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_594833.1 | Gene: | rna1 / 2541863 | PomBaseID: | SPAC22E12.07 | Length: | 386 | Species: | Schizosaccharomyces pombe |
| Alignment Length: | 389 | Identity: | 136/389 - (34%) |
|---|---|---|---|
| Similarity: | 197/389 - (50%) | Gaps: | 22/389 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 20 SFENKVLSWN--TAADVQDVVDALNKQTTVHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKN 82
Fly 83 MFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELL--RSPVCYSLQELLL 145
Fly 146 CNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIV 210
Fly 211 LEQNSIYIEGVE-ALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKT 274
Fly 275 NGAYHFGEALER-GNERLEVIDLGFNEINSDGGLVLVNAMGNK-PKLRILNLDGNSFGEEGSEKI 337
Fly 338 ISEMSKLPTAAALQPFQHQEEEDLED-EYQADKQDADYEEEEEVHEHANDTTEEADEDSE-GDE 399 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RanGAP | NP_001260578.1 | leucine-rich repeat | 45..77 | CDD:275380 | 10/31 (32%) |
| LRR_RI | 50..337 | CDD:238064 | 108/291 (37%) | ||
| leucine-rich repeat | 78..109 | CDD:275380 | 14/30 (47%) | ||
| leucine-rich repeat | 110..139 | CDD:275380 | 11/30 (37%) | ||
| leucine-rich repeat | 140..167 | CDD:275380 | 13/26 (50%) | ||
| leucine-rich repeat | 178..205 | CDD:275380 | 12/26 (46%) | ||
| leucine-rich repeat | 206..233 | CDD:275380 | 8/27 (30%) | ||
| leucine-rich repeat | 234..261 | CDD:275380 | 10/26 (38%) | ||
| leucine-rich repeat | 262..290 | CDD:275380 | 10/28 (36%) | ||
| rna1 | NP_594833.1 | RNA1 | 1..386 | CDD:227563 | 136/389 (35%) |
| LRR_RI | 3..332 | CDD:238064 | 118/334 (35%) | ||
| leucine-rich repeat | 96..120 | CDD:275380 | 10/23 (43%) | ||
| leucine-rich repeat | 124..145 | CDD:275380 | 9/20 (45%) | ||
| leucine-rich repeat | 161..188 | CDD:275380 | 12/26 (46%) | ||
| leucine-rich repeat | 189..217 | CDD:275380 | 8/27 (30%) | ||
| leucine-rich repeat | 218..245 | CDD:275380 | 10/26 (38%) | ||
| leucine-rich repeat | 246..273 | CDD:275380 | 9/26 (35%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5238 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 178 | 1.000 | Inparanoid score | I1142 |
| OMA | 1 | 1.010 | - | - | QHG52895 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004671 | |
| OrthoInspector | 1 | 1.000 | - | - | oto102039 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103239 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24113 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1163 |
| SonicParanoid | 1 | 1.000 | - | - | X2301 | |
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.900 | |||||