DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10237 and Clvs1

DIOPT Version :10

Sequence 1:NP_609967.1 Gene:CG10237 / 35222 FlyBaseID:FBgn0032783 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:311 Identity:91/311 - (29%)
Similarity:153/311 - (49%) Gaps:23/311 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LPSEFPLGVPTMLSDIDQLPTLQVGDYTLQFELGEPTAQGKEVAIKELRETPERQKEASKELARL 77
            ||.  |..:.|...|:.::..||.|       |...|.   |.|..||.|.|:...:..:::..:
  Rat     7 LPK--PQSISTWEGDLAKMTHLQAG-------LSPDTI---EKARLELNENPDVLHQDIQQVRDM 59

  Fly    78 LEAETDLLYPKGNEEWLIRYLRPCKYYPESARDLIKRYYAFKVKHADVYTDLKPSNEANIFKHNI 142
            :....|:.:.:.::.:::|:||..|::...|..|:.:|:.::..:.|::.:.|..:..  .|..:
  Rat    60 IITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPG--IKRAL 122

  Fly   143 LTVFP----NRDQLGRRILVLELGKRWKHKQVTLDEVFKGAVLFLEAAMLEPETQICGAVVIFDM 203
            :..||    |||..||:||:| ....|...:.:..::.:..:|.||..:.:||.||.|.::|.|.
  Rat   123 IDGFPGVLENRDHYGRKILLL-FAANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDW 186

  Fly   204 DGLSLQQTWQFTPPFAKRIVDWLQDSVPLRIKAIHIVNQPKIFQVVFALFKPFLKEKLRSRIIFH 268
            ...|.:|..:.||...|..::.||||.|.|...:|.||||.....::.|.|||||:|.|.||..|
  Rat   187 SNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLH 251

  Fly   269 GTDRESLHKYMSPKCLPAAYGGFREASRIDSDQWYQLLLKCDTEFDTINSY 319
            |.:..|||:.:.|:.||:.:||  .....|...|.:.||..|  :...|.|
  Rat   252 GNNLNSLHQLIHPEFLPSEFGG--TLPPYDMGTWARTLLGPD--YSDENDY 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10237NP_609967.1 CRAL_TRIO_N 68..115 CDD:215024 7/46 (15%)
CRAL_TRIO 141..290 CDD:459890 55/152 (36%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 7/45 (16%)
SEC14 123..274 CDD:469559 57/153 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.

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