DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and RABG3E

DIOPT Version :10

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_175355.1 Gene:RABG3E / 841353 AraportID:AT1G49300 Length:206 Species:Arabidopsis thaliana


Alignment Length:202 Identity:82/202 - (40%)
Similarity:116/202 - (57%) Gaps:19/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAG 70
            |.::..||||:||||.||||::|:.::|..::......|||.:|:.|::..:...:|||||||||
plant     2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66

  Fly    71 QERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFIVVGNKNDIP- 133
            ||||::|...||||:|.|:|.|.::...|.:.|..||.|||..|. .|.:.|||:|:|||.|:. 
plant    67 QERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVIGNKIDVDG 131

  Fly   134 AQKRQVSSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECV-------AEAELRQ 191
            ...|.||....:.|||.:....:.|||:|..|||.|||:          |:       .|.|...
plant   132 GSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFL----------CITTNAMKSGEEEEMY 186

  Fly   192 HGDTIDL 198
            ..||||:
plant   187 LPDTIDV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 74/171 (43%)
RABG3ENP_175355.1 Rab7 9..182 CDD:206655 74/182 (41%)

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