DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and rab7a

DIOPT Version :10

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001008026.1 Gene:rab7a / 493388 XenbaseID:XB-GENE-483564 Length:207 Species:Xenopus tropicalis


Alignment Length:201 Identity:81/201 - (40%)
Similarity:120/201 - (59%) Gaps:16/201 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQE 72
            :|..||||:||||.||||::|:.::|..::......|||.:|:.|:::||....|:|||||||||
 Frog     4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68

  Fly    73 RFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADV-DQDKFPFIVVGNKNDIPAQK 136
            ||::|...||||:|.|:|.|.:...::.|.|..||:|||..|.. |.:.|||:|:|||.|:  :.
 Frog    69 RFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKVDL--EN 131

  Fly   137 RQVSSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVAEAELRQHGDT---IDL 198
            |||::...|.||..:....:.|||:|.|.||..||          :.:|...|:|..:.   .:.
 Frog   132 RQVTTKRAQVWCHSKNNIPYFETSAKEAINVEQAF----------QTIARNALKQETEVELYNEF 186

  Fly   199 TRPIRL 204
            ..||:|
 Frog   187 PEPIKL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 75/170 (44%)
rab7aNP_001008026.1 Rab7 9..179 CDD:206655 76/181 (42%)

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