DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9 and rab10

DIOPT Version :10

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:213 Identity:65/213 - (30%)
Similarity:108/213 - (50%) Gaps:33/213 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQERFRA 76
            |.|::::||.||||:.:|.||..:.:......|||::|..|.:.:.|::..||||||||||||..
Zfish     9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHT 73

  Fly    77 LRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVSS 141
            :.|.:|||:...:|.|.:.:..|.:.:..|......:|:.|.::   :::|||.|: ..||.|..
Zfish    74 ITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVER---MLLGNKCDM-EDKRVVPK 134

  Fly   142 DAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVAEAELRQ------HGDTIDLTR 200
            ...:|...|..:. ..|||:||..|:..||:          .:||..|::      :.:.:|:: 
Zfish   135 AKGEQIAKEHGIR-FFETSAKANINIEKAFL----------TLAEDILKKTPVKEPNSENVDIS- 187

  Fly   201 PIRLVQRRICCTGGGGGG 218
                       ||||..|
Zfish   188 -----------TGGGVTG 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 56/165 (34%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 59/178 (33%)

Return to query results.
Submit another query.