DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and Rab9Fb

DIOPT Version :9

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:164 Identity:59/164 - (35%)
Similarity:87/164 - (53%) Gaps:5/164 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQE 72
            |...|.|:::|||.|||||.||.||..||:.|.:..|:|::|..:::.:.|....||||||||.|
  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67

  Fly    73 RFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKR 137
            ||::|...:|||:...||.|.:....|.:.:..|..|...   :..:....::||||.| ....|
  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRR---MSSESVNVMLVGNKCD-DLDNR 128

  Fly   138 QVSSDAVQQWCAEQKVACHIETSSKAATNVTDAF 171
            ||..:....: |..:.....|.|:|:..||.|.|
  Fly   129 QVRMEQGFNY-ANHRALGFYEVSAKSGANVNDVF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 59/164 (36%)
Ras 14..177 CDD:278499 57/158 (36%)
Rab9FbNP_727472.1 RAB 8..171 CDD:197555 57/159 (36%)
Rab 8..165 CDD:206640 57/159 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454371
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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