DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and Rab9D

DIOPT Version :10

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster


Alignment Length:194 Identity:58/194 - (29%)
Similarity:89/194 - (45%) Gaps:27/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERY----TLQIWDTAGQERF 74
            |:::|||.||||:.||.||..|::...:..|:|::  .::..|:...:    .||:|||:..|||
  Fly     9 KIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLD--RRECSVEFADWRMGRMLQVWDTSDDERF 71

  Fly    75 RALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQV 139
            :.|:....|.:...||.|.:....|.:.:..|..|.....   .||...::||||:|.| ..|||
  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLC---PDKVIVLLVGNKSDDP-NHRQV 132

  Fly   140 SSDAVQQWCAEQKVACHIETSSKAATNVTDAF----------------VLGLRQWRHMECVAEA 187
            |......:...|.: |..|.|:|:..||.|.|                ...|..|:..|..||:
  Fly   133 SMAQGFNYAHRQSI-CFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEEDAAES 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 54/183 (30%)
Rab9DNP_727432.1 Rab 8..167 CDD:206640 53/164 (32%)

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