DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and Rab39

DIOPT Version :9

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001245568.1 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster


Alignment Length:161 Identity:55/161 - (34%)
Similarity:96/161 - (59%) Gaps:6/161 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDI-VVDGERYTLQIWDTAGQERFRAL 77
            :::::||..||||:||..|...::.|.:..|:||:|..:.| :.||.:..||:||||||||||::
  Fly    11 RLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRSI 75

  Fly    78 RTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDI--PAQKRQVS 140
            ...:||.|...||.|.:.:..|.:.:.:|..|...:  ::..:..|.:||.|.|:  ....|:|:
  Fly    76 TKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRH--IEPHRPVFALVGCKLDLINAGGHREVT 138

  Fly   141 SDAVQQWCAEQKVACHIETSSKAATNVTDAF 171
            ::..|:: |:|.....:|||:::..||.:||
  Fly   139 TEEAQKF-AKQHGLHFVETSARSGANVEEAF 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 55/161 (34%)
Ras 14..177 CDD:278499 55/161 (34%)
Rab39NP_001245568.1 Rab39 8..218 CDD:133311 55/161 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454507
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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