DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9 and rab7b

DIOPT Version :10

Sequence 1:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001096381.1 Gene:rab7b / 100124979 XenbaseID:XB-GENE-5824213 Length:201 Species:Xenopus tropicalis


Alignment Length:200 Identity:76/200 - (38%)
Similarity:109/200 - (54%) Gaps:8/200 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQERFRAL 77
            ||:.|:|..|.||::||.::|...:..:..:|:|...::|.|.:|.....||||||.||||||.|
 Frog     9 LKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQIWDTGGQERFRTL 73

  Fly    78 RTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVSSD 142
            .:.||:|||.|||.:.:.|.||...|..||.:||:........||.||:|||.|:  ..||||.:
 Frog    74 VSTFYKGSDGCLLVFDVTDEDSFSCLEFWRKDFLDKIPPPIADFPMIVLGNKIDL--NDRQVSKE 136

  Fly   143 AVQQWCAEQKVACHIETSSKAATNVTDAF-VLGLRQWRHMECVAEAELRQHGDTIDLTRPIRLVQ 206
            ....||..:.|: ::|.|:|...||..|| :|..:...|.:...|:.|   |::|.| .|.....
 Frog   137 LAMSWCKGKNVS-YLEVSAKNNVNVELAFEMLSRKALIHYQESKESCL---GESIKL-YPTEDSH 196

  Fly   207 RRICC 211
            ...||
 Frog   197 SSTCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9NP_609966.1 Rab9 8..178 CDD:206697 67/165 (41%)
rab7bNP_001096381.1 Rab 9..169 CDD:206640 67/162 (41%)

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