DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp12 and alpi.1

DIOPT Version :9

Sequence 1:NP_001188848.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001014375.1 Gene:alpi.1 / 541539 ZFINID:ZDB-GENE-050327-78 Length:532 Species:Danio rerio


Alignment Length:518 Identity:201/518 - (38%)
Similarity:279/518 - (53%) Gaps:56/518 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ALLITAMCIGFVVHYGMSGDVGDMETVSYWPVDLPKEQKEWYDQGIDELQKAVSRQFNRRRAKNV 136
            ||::...|              .:::.:.|    .|:...|.||....||.|::......||||:
Zfish    18 ALVLNTSC--------------SLDSAAEW----EKDPAYWNDQARRTLQTALTLPLRVNRAKNI 64

  Fly   137 ILFVGDGMGPNTVTAARILGVKEEG------LLRWEQFPDMGLLKTYCADKQVPDSFSTATALFG 195
            |||||||||.:||:|||||..:.||      :|..:.||.:.|.||||.||||.||.|||||...
Zfish    65 ILFVGDGMGVSTVSAARILRGQMEGQSGEETILAMDTFPYLALSKTYCVDKQVADSASTATAYHC 129

  Fly   196 GVKVNYETGGVDANVPLGNCSASLKEDHHVQTILKWAQVDGMRTGFVTTTRVTHATPAALYAHVP 260
            |||.|.:|.|:.|......|:.:.  .:.|.::|..|:..|...|.||||||.||:|||.|||..
Zfish   130 GVKANAKTVGLSAKAVAYECNTTF--GNEVFSVLHRAKAQGKSVGIVTTTRVQHASPAAAYAHSV 192

  Fly   261 DRRWECESGMPAEAQGQGCMDIARQLIEQPTGQSINVIMGGGRQMLVSDVTGSAADPLDTWAGQS 325
            .|:|..::.:|:||:.|||.|||.||:   |...|:||:||||..:....|........:..|..
Zfish   193 SRKWYSDADVPSEARRQGCKDIATQLV---TNTDIDVILGGGRMYMTPKGTPDPEYSSSSHKGDR 254

  Fly   326 KDGRDLIRDWRLKKADEGVSHAVVQNNRELWN---LNGQDV---DYVLGIFANGHLMYDHERDRS 384
            ||.::||..|  ..|.:|      :|.:.:||   .|..||   |.::|:|....:.::..|:|:
Zfish   255 KDKKNLINVW--LNARKG------RNAQYVWNKEQFNAVDVKTTDCLMGLFEPKDMRFEVFRNRT 311

  Fly   385 DAGMPSLSNMTLKALEVLGNSDKGFLLVVEAGLIDQAHHRGNARKALSEVLELNAAVESTLSFLK 449
            ..  ||:.:||.||:::|..:.|||.|.||.|.||..||.|.|:.||:|.:..:.|::.......
Zfish   312 RD--PSIVDMTEKAIQILSKNPKGFFLFVEGGRIDHGHHDGVAKLALTETIMFDRAIQRASELTS 374

  Fly   450 SSDRLDETLVIVTADHSHSLTINGHPDRGSSILGLAGNSKTEGTPYTTLTY--GTSYQGFQVDPQ 512
            .||    ||.:|||||||..|..|...||:.|.|||.....:..|||::.|  |..|     |..
Zfish   375 ESD----TLTVVTADHSHVFTFGGKTPRGNPIFGLAPKQAEDDLPYTSILYANGPGY-----DHV 430

  Fly   513 TQSRKDPTADDITAWEYTQQAAINTDENLHGGSDVTIHADGAMSYLFHGVHEQSYVAHAISYA 575
            ..:|.:.:..|....||.||||:..:...|||.||.|:|.|.|::|||||.||:|||||::||
Zfish   431 NGTRGNVSVLDYYDEEYKQQAAVPLESETHGGEDVAIYAKGPMAHLFHGVKEQNYVAHAMAYA 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp12NP_001188848.1 ALP_like 134..579 CDD:304875 188/456 (41%)
alpi.1NP_001014375.1 PhoA 46..493 CDD:224699 191/470 (41%)
Alk_phosphatase 61..496 CDD:278666 189/457 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593230
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100381
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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