DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp12 and Alp5

DIOPT Version :10

Sequence 1:NP_609963.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_650931.1 Gene:Alp5 / 42482 FlyBaseID:FBgn0038845 Length:522 Species:Drosophila melanogaster


Alignment Length:500 Identity:197/500 - (39%)
Similarity:276/500 - (55%) Gaps:48/500 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 DLPKEQKE---------------WYDQGIDELQKAVSRQFNRRRAKNVILFVGDGMGPNTVTAAR 153
            |:|:.::.               |..||:..:|:.::.:.|:|:|||||||:|||||..|.:|||
  Fly    40 DMPEPERHGKAFRVVDGEDTNAYWRQQGVQFVQQKLASEPNKRQAKNVILFLGDGMGVTTTSAAR 104

  Fly   154 ILGVKEEGLLRWEQFPDMGLLKTYCADKQVPDSFSTATALFGGVKVNYETGGVDANVPLGNCSAS 218
            .|...||..|.:|.||..||.|||..||.||||..||||...|||....|.||:..||..:|...
  Fly   105 NLLGGEEKSLSFENFPFTGLSKTYSVDKIVPDSACTATAYLCGVKGQEGTIGVNGQVPRTDCKVM 169

  Fly   219 LKEDHHVQTILKWAQVDGMRTGFVTTTRVTHATPAALYAHVPDRRWECESGMPAE-AQGQGCMDI 282
            |.|..||.:|.|||...|...|.|||||||||:|:.:|||:.:|.||.::.:..: ..|.|..||
  Fly   170 LDESTHVDSIAKWAMEAGKWAGLVTTTRVTHASPSGVYAHIAERDWENDAEVATDCGAGSGINDI 234

  Fly   283 ARQLIEQPTGQSINVIMGGGRQMLVSDVTGSAADPLDTWAGQSKDGRDLIRDWRLKKADEGVSHA 347
            |.||.....|..:.|||||||:..|.       ..|::| |:..||.:||.::  |.|.|  ::.
  Fly   235 AYQLARGEVGSKLKVIMGGGRKHFVD-------SSLESW-GKRTDGLNLIDEF--KSASE--NNV 287

  Fly   348 VVQNNRELWNLNGQDVDYVLGIFANGHLMYDHERDRSDAGMPSLSNMTLKALEVLGNSDKGFLLV 412
            .|....||..::....|.:||:|.:.||.|..| ..:::..|:|..||.||:|.:..:::|:.|.
  Fly   288 YVTTAAELAAVDVTKTDRLLGLFNDDHLQYLME-TTTESSQPTLEQMTRKAIEYMSQNEQGYFLF 351

  Fly   413 VEAGLIDQAHHRGNARKALSEVLELNAAVESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDR 477
            :|.|.||||||...||.||:|.:|.:.|:.:.......    |:||::|||||||..|..|:..|
  Fly   352 IEGGRIDQAHHINQARMALNETIEFSKAIAAAQELTSE----DDTLLVVTADHSHVFTYAGYSYR 412

  Fly   478 GSSILGLAGNSKTEGTPYTTLTY--GTSYQGFQVDPQTQSRKDPTA------DDITAWEYTQQAA 534
            ||.:.|....:..:|.||..|:|  |.||:.| .|.:|..|||||.      ||    |:.....
  Fly   413 GSDVFGKTPVNGHDGKPYMVLSYANGPSYENF-YDAETMERKDPTTVVKGDHDD----EFPSGVP 472

  Fly   535 INTDENLHGGSDVTIHADGAMSYLFHGVHEQSYVAHAISYALRIG 579
            |:.|.  |||.||.::|.|..::||.||:|||.:.|.::||..:|
  Fly   473 IDMDS--HGGDDVPVYALGPWAHLFTGVYEQSTIPHMMAYASCLG 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp12NP_609963.1 ALP_like 134..579 CDD:474031 187/453 (41%)
Alp5NP_650931.1 alkPPc 85..515 CDD:214515 187/453 (41%)

Return to query results.
Submit another query.