DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp12 and Alp7

DIOPT Version :9

Sequence 1:NP_001188848.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_611653.1 Gene:Alp7 / 37538 FlyBaseID:FBgn0034710 Length:543 Species:Drosophila melanogaster


Alignment Length:492 Identity:187/492 - (38%)
Similarity:273/492 - (55%) Gaps:38/492 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PKEQKE---WYDQGIDELQKAVSR-QFNRRRAKNVILFVGDGMGPNTVTAARIL------GVKEE 160
            |:|:|.   |||...:|:.|.:.: |.::|:|||||||:||||..:||.||||.      ...||
  Fly    62 PEEEKNAQFWYDLAYEEIAKRLEQPQLDKRKAKNVILFLGDGMSLSTVAAARIHKGQLKGNTGEE 126

  Fly   161 GLLRWEQFPDMGLLKTYCADKQVPDSFSTATALFGGVKVNYETGGVDANVPLGNCSASLKEDHHV 225
            ..|.:|:||..||.:|||::.|||||..||||...|||.|....|:.|.|...|||.|....:.|
  Fly   127 DSLSFEKFPYTGLSRTYCSNAQVPDSACTATAYLCGVKTNIVALGITAAVSFNNCSGSEDPANQV 191

  Fly   226 QTILKWAQVDGMRTGFVTTTRVTHATPAALYAHVPDRRWECESGMPAEAQGQG----CMDIARQL 286
            .:|..|||..|..||.||||.:|||:|:..||...:|.:|.::.:....:||.    |.|||.||
  Fly   192 DSIAAWAQAAGKATGIVTTTTLTHASPSGAYAKTTNRFFESDTDILTYGEGQNDPATCTDIATQL 256

  Fly   287 IEQPTGQSINVIMGGG-RQMLVSDVTGSAADPLDTWAGQSKDGRDLIRDWRLKKADEGV--SHAV 348
            |.|..|::.:|::||| .:.|.:.:|    ||.:. .|:..||.:|:..|      :|:  ...:
  Fly   257 ITQAPGKNFDVMLGGGIGKFLPNTIT----DPFNK-KGERSDGVNLLSRW------QGLHPGGVL 310

  Fly   349 VQNNRELWNLNGQDVDYVLGIFANGHLMYDHERDRSDAGMPSLSNMTLKALEVLGNSDKGFLLVV 413
            ..|..:|.::|...:..::|.|.:|.:.::...|..:.  |:|:.||.||:||:...|.|:.|.|
  Fly   311 AYNRNQLLSVNVSKITNLIGTFRSGVMSFNKMADPKEE--PTLAEMTRKAIEVVSKRDGGYFLFV 373

  Fly   414 EAGLIDQAHHRGNARKALSEVLELNAAVESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDRG 478
            |.||||..:|..:...:|||.|:...||:..|.....    :|||::||:||:|.|||:|:|.||
  Fly   374 EGGLIDYGNHFNSPTYSLSETLQFEQAVQEALDITDP----EETLIVVTSDHAHPLTISGYPGRG 434

  Fly   479 SSILGL-AGNSKTEGTPYTTLTYGTSYQGFQVDPQTQSRKDPTADDITAWEYTQQAAINTDENLH 542
            :.|||| ..::...|..|.||.|......: :|...| |.|.| |.|.|.::...:.|:....:|
  Fly   435 TPILGLNQDDTDVNGVKYATLNYAVGTNQY-LDEHGQ-RIDLT-DQIGAEDFIHPSYIHGTIGVH 496

  Fly   543 GGSDVTIHADGAMSYLFHGVHEQSYVAHAISYALRIG 579
            .|.||.|.|.|..|:||.||.:||.:.|.::||..||
  Fly   497 AGDDVGIFATGPQSHLFTGVMQQSTIPHLMAYASCIG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp12NP_001188848.1 ALP_like 134..579 CDD:304875 174/458 (38%)
Alp7NP_611653.1 ALP_like 94..533 CDD:304875 174/458 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466666
Domainoid 1 1.000 141 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

Return to query results.
Submit another query.