DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp12 and LOC1268988

DIOPT Version :10

Sequence 1:NP_609963.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster
Sequence 2:XP_307568.5 Gene:LOC1268988 / 1268988 VectorBaseID:AGAMI1_009650 Length:564 Species:Anopheles gambiae


Alignment Length:541 Identity:195/541 - (36%)
Similarity:286/541 - (52%) Gaps:50/541 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ISVVFSALLITAMCIGFVVHYGMSGDVGD----------------METVSYWPVDLPKEQKE--- 111
            :.:::..|:||..     ||..:.|.:.:                |:...:.|...|..:|:   
Mosquito     1 MGLIYVLLVITVS-----VHITVDGVIANPLSNFVTVPNLGPTHPMDNPDWVPPTAPTREKDREY 60

  Fly   112 WYDQGIDELQKAVS-RQFNRRRAKNVILFVGDGMGPNTVTAARILGVKEEGLLRWEQFPDMGLLK 175
            |...|...|::.:. .:.|...|||||:|:|||:...|:.|.|:....||..|.:|.||..||.|
Mosquito    61 WLTSGQARLRRQLELNEQNINVAKNVIIFLGDGLSIPTLAATRMYMGGEELELSFETFPHTGLAK 125

  Fly   176 TYCADKQVPDSFSTATALFGGVKVNYETGGVDANVPLGNCSASLKEDHHVQTILKWAQVDGMRTG 240
            |||.:.||.||..||.|:..|||.||.|.||..:|||.||..||:|.:.:.:|||:||.||..||
Mosquito   126 TYCINYQVSDSACTAAAILTGVKNNYGTIGVSGHVPLRNCPLSLQESNRLTSILKYAQEDGRSTG 190

  Fly   241 FVTTTRVTHATPAALYAHVPDRRWECESGMPAEAQGQGCMDIARQLIEQPTGQSINVIMGGG-RQ 304
            .||.||:||||||..||....|.||.::.:|     .||:|||.||:....|.::.|.:||| |.
Mosquito   191 IVTNTRITHATPAVAYAVSGARYWEDDTELP-----PGCVDIATQLVHGDIGTNLTVALGGGSRH 250

  Fly   305 MLVSDVTGSAADPLDTWAGQSKDGRDLIRDWRLKKADEGVSHAVVQNNRELWNLNGQDVDYVLGI 369
            ...:.......:|     |:..|||:|:.:|........:....|.:...|..:..:.||.:.|:
Mosquito   251 FYPTGTLDRNGEP-----GRRTDGRNLVDEWINDAVARELRAQFVHDRTGLMAIQPELVDRLFGL 310

  Fly   370 FANGHLMY----DHERDRSDAGMPSLSNMTLKALEVLGNSDKGFLLVVEAGLIDQAHHRGNARKA 430
            |:..|:.|    |.:|:      |||..||:||||:|..:|:|::|:||.|.||.|||...|:.|
Mosquito   311 FSGNHMSYRMLADAQRE------PSLQEMTIKALEILRRNDRGYVLLVEGGRIDHAHHDNLAKLA 369

  Fly   431 LSEVLELNAAVESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDRGSSILGLAGNSKTEGTPY 495
            |.|.:||:.||||.:..|..|  :.||||:|||||||:.||.|:|.||:.||.....|:.:..|:
Mosquito   370 LDETVELHRAVESAVRQLDES--VQETLVLVTADHSHTFTIGGYPVRGNDILSTGDFSRFDRMPF 432

  Fly   496 TTLTY--GTSYQGFQVDPQTQSRKDPTADDITAWEYTQQAAINTDENLHGGSDVTIHADGAMSYL 558
            .||.|  |.||.....:...:...|...|.....::|..||:..::..|||.||.:.|.|..:::
Mosquito   433 FTLAYANGPSYADHFYENGGRRNPDDMRDRFHDPDFTYPAAVPYEDETHGGDDVAVFAKGPWAHI 497

  Fly   559 FHGVHEQSYVAHAISYALRIG 579
            |.|::||..:.|.:.:|..:|
Mosquito   498 FSGLYEQHVIGHGLLFAACLG 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp12NP_609963.1 ALP_like 134..579 CDD:474031 179/451 (40%)
LOC1268988XP_307568.5 None

Return to query results.
Submit another query.