DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and REG4

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001152824.1 Gene:REG4 / 83998 HGNCID:22977 Length:158 Species:Homo sapiens


Alignment Length:180 Identity:32/180 - (17%)
Similarity:60/180 - (33%) Gaps:47/180 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLITLLVIAKT--------------GWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTES 57
            ||:.|..:|||              ||...|       .|.:|.      |.|:.          
Human     8 LLLLLSCLAKTGVLGDIIMRPSCAPGWFYHK-------SNCYGY------FRKLR---------- 49

  Fly    58 LNWYEAYEKCREL--NSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQR 120
             ||.:|..:|:..  .:.|.:..:.:|...:..:::........|...:|..|....:|...|..
Human    50 -NWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQRSQPIWIGLHDPQKRQQWQWIDGAMY 113

  Fly   121 ISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKY 170
            :.. .|:..   :.|..:||..:.   .::.....:...|::..:.|.||
Human   114 LYR-SWSGK---SMGGNKHCAEMS---SNNNFLTWSSNECNKRQHFLCKY 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 19/122 (16%)
REG4NP_001152824.1 CLECT_REG-1_like 30..156 CDD:153064 24/156 (15%)
Carbohydrate-binding 98..103 2/4 (50%)
Carbohydrate-binding 135..137 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.