DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and LOC688858

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_038945829.1 Gene:LOC688858 / 688858 RGDID:1584108 Length:207 Species:Rattus norvegicus


Alignment Length:189 Identity:52/189 - (27%)
Similarity:82/189 - (43%) Gaps:39/189 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTVLLITLLVIAKTGWTREKF---SIQVNE---------GNTFGALVKAEP--FTKINDGYYFFG 54
            |..||:|:|:        :.|   |..|||         |....:|.:..|  :|..:...|:|.
  Rat    36 LAGLLVTVLI--------QGFKDPSSSVNEKIYKQLMQLGIGVDSLCRPCPWEWTFFHGRCYYFS 92

  Fly    55 TESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQ 119
            ....||.::...|:|::::|||.|:|:|...:..||...|..   |...:||.:..:.:|...:.
  Rat    93 KSQRNWNDSVAACQEVDAQLVTVESDEEQTFLDTFLKNKGPA---WMGLSDLKQESTWQWVDGSP 154

  Fly   120 RISSLR--WARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICEAPE 176
            ...|.|  |.:.:|:|.| .|.|..|       |:...||..|.   |..| :||:.||
  Rat   155 LSDSFRKYWIKGEPNNQG-NEDCAEL-------REDGWNDNKCD---NKKF-WICKKPE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 35/123 (28%)
LOC688858XP_038945829.1 CLECT_DC-SIGN_like 77..199 CDD:153060 38/136 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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