DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and Reg4

DIOPT Version :10

Sequence 1:NP_477200.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_080604.2 Gene:Reg4 / 67709 MGIID:1914959 Length:157 Species:Mus musculus


Alignment Length:128 Identity:32/128 - (25%)
Similarity:48/128 - (37%) Gaps:20/128 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GYYFFGTESLNWYEAYEKCREL--NSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGS 111
            ||:   .:..||..|..:|:..  .|.|.:....:|...::.::|.....|..|...:|..|...
Mouse    42 GYF---RKLRNWSHAELECQSYGNGSHLASVLNQKEASVISKYITGYQRNLPVWIGLHDPQKKQL 103

  Fly   112 HRW---FTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKF-ELNDRPCSQDPNSLFKY 170
            .:|   .||..|    ||   .|....:..||..:.  .||  || ..|...|:...:.|.||
Mouse   104 WQWTDGSTNLYR----RW---NPRTKSEARHCAEMN--PKD--KFLTWNKNGCANRQHFLCKY 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_477200.1 CLECT 51..173 CDD:153057 30/126 (24%)
Reg4NP_080604.2 CLECT_REG-1_like 29..155 CDD:153064 30/126 (24%)

Return to query results.
Submit another query.