DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and REG1B

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_006498.1 Gene:REG1B / 5968 HGNCID:9952 Length:166 Species:Homo sapiens


Alignment Length:176 Identity:39/176 - (22%)
Similarity:65/176 - (36%) Gaps:51/176 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NTFGALVKAEPFTKINDGY------------------------YFFGTESLNWYEAYEKCRELNS 72
            |:|..|:.:..|..::.|.                        |:|..:...|.:|...|:.:||
Human     5 NSFFMLISSLMFLSLSQGQESQTELPNPRISCPEGTNAYRSYCYYFNEDPETWVDADLYCQNMNS 69

  Fly    73 -ELVTFETDQEFDAVTAFLTANGSR--LTYWTSGNDLAKTGSHRW-FTNAQRISSLRWARNQPD- 132
             .||:..|..| .|..|.|....|.  ...|...:|..|  :.|| :::...:|...|....|. 
Human    70 GNLVSVLTQAE-GAFVASLIKESSTDDSNVWIGLHDPKK--NRRWHWSSGSLVSYKSWDTGSPSS 131

  Fly   133 -NAGQKEHCIHL----GYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
             |||   :|..|    |:     :|::  |..|.:.    |.::|:
Human   132 ANAG---YCASLTSCSGF-----KKWK--DESCEKK----FSFVCK 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 33/131 (25%)
REG1BNP_006498.1 CLECT 36..164 CDD:413318 34/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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