DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and si:dkey-241l7.6

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_021324413.1 Gene:si:dkey-241l7.6 / 567708 ZFINID:ZDB-GENE-041014-235 Length:156 Species:Danio rerio


Alignment Length:172 Identity:35/172 - (20%)
Similarity:64/172 - (37%) Gaps:28/172 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTESLNWYEAYE 65
            |..|..||:..:|.:..|...   |:|...|           ::......:.|.:.|:||..|..
Zfish     6 MFLLRSLLLLSIVFSMEGADE---SVQCPRG-----------WSGSGSRCFRFFSRSVNWVTAER 56

  Fly    66 KCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQRISSLRWARNQ 130
            .|:.|...|.:...:.|.|.:...:..:   ...|..|:|..:.|...| ::....|...|...:
Zfish    57 NCQSLGGNLASVHDEDENDFLLGLVPVS---TRCWIGGHDGEQDGQWLW-SDGSVYSYTNWCSGE 117

  Fly   131 PDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYIC 172
            |.:.  .|||:.:.:    :.....|::.||    :...|:|
Zfish   118 PSSG--SEHCLEINW----TSDHCWNNQGCS----TRMGYLC 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 26/122 (21%)
si:dkey-241l7.6XP_021324413.1 CLECT 30..149 CDD:214480 26/143 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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