DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Reg4

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001004096.1 Gene:Reg4 / 445583 RGDID:1303341 Length:157 Species:Rattus norvegicus


Alignment Length:128 Identity:32/128 - (25%)
Similarity:50/128 - (39%) Gaps:20/128 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GYYFFGTESLNWYEAYEKCREL--NSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGS 111
            ||:   .:..||..|..:|:..  .|.|.:....:|...::.::|.....|..|...:|..|..|
  Rat    42 GYF---RKLRNWSHAELECQSYGNGSHLASVLNPKEASVISKYITGYQRSLPVWIGLHDPQKNAS 103

  Fly   112 HRWF---TNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKF-ELNDRPCSQDPNSLFKY 170
            .:|.   ||..|    .|:   |....:..||..:.  .||  || ..|...|::..:.|.||
  Rat   104 WQWIDGSTNQYR----PWS---PRTKSEARHCTEMN--PKD--KFLTWNKNGCTKRQHFLCKY 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 30/126 (24%)
Reg4NP_001004096.1 CLECT_REG-1_like 29..155 CDD:153064 30/126 (24%)
Carbohydrate-binding. /evidence=ECO:0000250 97..101 1/3 (33%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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