DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and Colec11

DIOPT Version :10

Sequence 1:NP_477200.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001414101.1 Gene:Colec11 / 366588 RGDID:1309678 Length:277 Species:Rattus norvegicus


Alignment Length:127 Identity:24/127 - (18%)
Similarity:47/127 - (37%) Gaps:19/127 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWF 115
            |....|...:.:|...|:.....| :...|:..:.:.|...|.......:...|||.:.|:..:.
  Rat   160 YLLVKEEKRYADAQLSCQGRGGTL-SMPKDEAANGLMASYLAQAGLARVFIGINDLEREGAFVYS 223

  Fly   116 TNAQRISSLRWARNQPDNAGQKEHCIHL----GYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
            ..:...:..:|...:|:||..:|.|:.:    |:          ||..|    :....::||
  Rat   224 DRSPMQTFNKWRSGEPNNAYDEEDCVEMVASGGW----------NDVAC----HITMYFMCE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_477200.1 CLECT 51..173 CDD:153057 22/125 (18%)
Colec11NP_001414101.1 None

Return to query results.
Submit another query.