DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Clec4a3

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001005891.1 Gene:Clec4a3 / 362431 RGDID:1359528 Length:237 Species:Rattus norvegicus


Alignment Length:212 Identity:41/212 - (19%)
Similarity:80/212 - (37%) Gaps:67/212 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKI-------------------- 46
            |.||:|..:.|:|     ..:|:| |:.|..|   ::|...:|::                    
  Rat    55 LLLTILFSSALII-----LFKKYS-QLLEEKT---IMKELNYTELECTKWDSLLEDKVWSCCPKD 110

  Fly    47 ----NDGYYFFGTESL-NWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDL 106
                :...||..|:|: :|.|:.|||..:.:.||...:.:|.|.:...|..:.:   |:..   |
  Rat   111 WKPFDSNCYFPSTDSVESWMESEEKCSGIGAHLVVIHSQEEQDFLPRILDTHAA---YFIG---L 169

  Fly   107 AKTGSHRWFTNAQRISSLRWARNQPDN-----------AGQKEHCIHLGYIYKDSRKFELNDRPC 160
            :..|..:|          :|....|.|           :...|.|:.:.  :.::..:..:|..|
  Rat   170 SDPGHRQW----------QWVDQTPYNGNATFWHEGEPSSDNEQCVIIN--HHENTGWGWSDSSC 222

  Fly   161 SQDPNSLFKYICEAPEM 177
            |...    |.:|:..::
  Rat   223 SDKQ----KLVCQVKKI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 27/133 (20%)
Clec4a3NP_001005891.1 CLECT_DC-SIGN_like 107..231 CDD:153060 27/145 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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