DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Clec4a3

DIOPT Version :10

Sequence 1:NP_477200.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001005891.1 Gene:Clec4a3 / 362431 RGDID:1359528 Length:237 Species:Rattus norvegicus


Alignment Length:212 Identity:41/212 - (19%)
Similarity:80/212 - (37%) Gaps:67/212 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKI-------------------- 46
            |.||:|..:.|:|     ..:|:| |:.|..|   ::|...:|::                    
  Rat    55 LLLTILFSSALII-----LFKKYS-QLLEEKT---IMKELNYTELECTKWDSLLEDKVWSCCPKD 110

  Fly    47 ----NDGYYFFGTESL-NWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDL 106
                :...||..|:|: :|.|:.|||..:.:.||...:.:|.|.:...|..:.:   |:..   |
  Rat   111 WKPFDSNCYFPSTDSVESWMESEEKCSGIGAHLVVIHSQEEQDFLPRILDTHAA---YFIG---L 169

  Fly   107 AKTGSHRWFTNAQRISSLRWARNQPDN-----------AGQKEHCIHLGYIYKDSRKFELNDRPC 160
            :..|..:|          :|....|.|           :...|.|:.:.  :.::..:..:|..|
  Rat   170 SDPGHRQW----------QWVDQTPYNGNATFWHEGEPSSDNEQCVIIN--HHENTGWGWSDSSC 222

  Fly   161 SQDPNSLFKYICEAPEM 177
            |...    |.:|:..::
  Rat   223 SDKQ----KLVCQVKKI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_477200.1 CLECT 51..173 CDD:153057 27/133 (20%)
Clec4a3NP_001005891.1 CLECT_DC-SIGN_like 107..231 CDD:153060 27/145 (19%)

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