DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Clec4a1

DIOPT Version :10

Sequence 1:NP_477200.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:205 Identity:42/205 - (20%)
Similarity:79/205 - (38%) Gaps:43/205 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVIAKTGWTR--EKFSIQVNEGNTFGALVKA----------------------- 40
            :|.|.:..:.|.:::..|.|.  ..:|..:.|.||...|..|                       
  Rat    52 LLALLIFFLVLAILSSVGLTTLFHMYSDLLEEKNTLQQLNHAKLHCIKNHSSVEDKVWSCCPKNW 116

  Fly    41 EPFTKINDGYYFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGND 105
            :||   ....||...:|.:|.::.|||....:.|:...:.:|.|.:|..|   ..|..|:...:|
  Rat   117 KPF---GSHCYFTSRDSASWSDSEEKCSHRGAHLLVIHSQEEQDFITDTL---NPRAHYYVGLSD 175

  Fly   106 LAKTGSHRWFTNA---QRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSL 167
            ....|..:|....   |..:|  |..::|  :|.|..|:.|.| :.:.:.:..:..||    :..
  Rat   176 TEGHGKWQWVDQTPFNQNATS--WHADEP--SGNKGFCVVLSY-HPNLKGWGWSVAPC----DGY 231

  Fly   168 FKYICEAPEM 177
            .:.:|:..::
  Rat   232 HRLVCKMRQL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_477200.1 CLECT 51..173 CDD:153057 28/124 (23%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 31/140 (22%)

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