DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Asgr2

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_058885.1 Gene:Asgr2 / 29403 RGDID:2161 Length:301 Species:Rattus norvegicus


Alignment Length:129 Identity:35/129 - (27%)
Similarity:53/129 - (41%) Gaps:22/129 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWF 115
            |:|..:.|.|.||.:.|:..|:.|:...:.:|.:    |:..:......|....|  |.||.:|.
  Rat   182 YWFSRDGLTWAEADQYCQMENAHLLVINSREEQE----FVVKHRGAFHIWIGLTD--KDGSWKWV 240

  Fly   116 TNAQRISSLR-WARNQPDN-----AGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
            ...:..|:.: ||..||||     .|..|.|..   |..|..   .||..|.|    :.::.||
  Rat   241 DGTEYRSNFKNWAFTQPDNWQGHEEGGSEDCAE---ILSDGL---WNDNFCQQ----VNRWACE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 33/127 (26%)
Asgr2NP_058885.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Lectin_N 29..162 CDD:397859
CLECT_DC-SIGN_like 170..295 CDD:153060 35/129 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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