DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Mrc1

DIOPT Version :10

Sequence 1:NP_477200.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001099593.2 Gene:Mrc1 / 291327 RGDID:1309353 Length:1456 Species:Rattus norvegicus


Alignment Length:140 Identity:31/140 - (22%)
Similarity:54/140 - (38%) Gaps:38/140 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGS-------RLTY--------WTSGND 105
            |...|:|:.:.|:.:..||.:.::..|...:...:|::||       .|||        |:.|:.
  Rat   669 EKKTWFESRDFCKAIGGELASIKSKDEQQVIWRLITSSGSYHELFWLGLTYGSPSEGFTWSDGSP 733

  Fly   106 LAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKY 170
                           :|...||..:|:|....|:|..|    |.......||..|..    |..:
  Rat   734 ---------------VSYENWAYGEPNNYQNVEYCGEL----KGDPGMSWNDINCEH----LNNW 775

  Fly   171 ICEAPEMETI 180
            ||:..:.:|:
  Rat   776 ICQIQKGKTL 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_477200.1 CLECT 51..173 CDD:153057 29/131 (22%)
Mrc1NP_001099593.2 beta-trefoil_Ricin_MRC1 23..145 CDD:467785
FN2 161..209 CDD:128373
CLECT 234..342 CDD:153057
CLECT 362..487 CDD:214480
CLECT 504..626 CDD:214480
CLECT 659..779 CDD:153057 30/132 (23%)
CLECT 802..923 CDD:214480
CLECT 944..1079 CDD:214480
CLECT 1096..1212 CDD:214480
CLECT 1229..1355 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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