DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Reg3g

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_775120.1 Gene:Reg3g / 24620 RGDID:3256 Length:174 Species:Rattus norvegicus


Alignment Length:131 Identity:29/131 - (22%)
Similarity:53/131 - (40%) Gaps:19/131 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YFFGTESLNWYEAYEKCRELNS-ELVTFETDQEFDAVTAFLTANG-SRLTYW------TSGNDLA 107
            |...:.|.:|::|...|::..| .||:..:..|...|::.:.::| |....|      |.|.: .
  Rat    52 YALFSVSKSWFDADLACQKRPSGHLVSVLSGSEASFVSSLIKSSGNSGQNVWIGLHDPTLGQE-P 115

  Fly   108 KTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYIC 172
            ..|...| :||..::...|..|....:|  .||   |.:.:.|......:..|..:    ..|:|
  Rat   116 NRGGWEW-SNADVMNYFNWETNPSSVSG--SHC---GTLTRASGFLRWRENNCISE----LPYVC 170

  Fly   173 E 173
            :
  Rat   171 K 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 28/129 (22%)
Reg3gNP_775120.1 CLECT_REG-1_like 40..172 CDD:153064 29/131 (22%)
EPN. /evidence=ECO:0000250 114..116 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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