DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Reg3a

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_035389.1 Gene:Reg3a / 19694 MGIID:109408 Length:175 Species:Mus musculus


Alignment Length:181 Identity:40/181 - (22%)
Similarity:66/181 - (36%) Gaps:32/181 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVIAKTGWTREK---FSIQVNEGNTFGALVKAEPFTKINDGY-------YFFGTESLNWYEAYEK 66
            ||:....|....   |..|| :|..|...|.: |.|....||       |.......:|::|...
Mouse     5 LVLNSISWMLLSCLLFVFQV-QGEDFQKEVPS-PRTSCPMGYKAYRSHCYALVMTPKSWFQADLV 67

  Fly    67 CRELNS-ELVTFETDQEFDAVTAFLTANGSRLTY---WTSGND-----LAKTGSHRWFTNAQRIS 122
            |::..| .||:..:..|...|::.:  ||....|   |...:|     ....|...| :|:..::
Mouse    68 CQKRPSGHLVSILSGGEASFVSSLV--NGRVDNYQDIWIGLHDPTMGQQPNGGGWEW-SNSDVLN 129

  Fly   123 SLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
            .|.| ...|.:...:.||   |.:...|...:..|..|    :....::|:
Mouse   130 YLNW-DGDPSSTVNRGHC---GSLTASSGFLKWGDYYC----DGTLPFVCK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 26/130 (20%)
Reg3aNP_035389.1 CLECT 40..173 CDD:295302 29/144 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11565
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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