DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-96

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_492869.1 Gene:clec-96 / 191213 WormBaseID:WBGene00013930 Length:189 Species:Caenorhabditis elegans


Alignment Length:205 Identity:37/205 - (18%)
Similarity:66/205 - (32%) Gaps:58/205 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTVLLITLL-----VIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTESLNWYEA 63
            |.:|.::||     ...:|||     |:|....:.|..:       |:     |.||.:..  :|
 Worm     2 LLLLAVSLLGTVTCQTCETGW-----SVQGLRASGFWCV-------KV-----FLGTYTQP--QA 47

  Fly    64 YEKCRELNSEL--VTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQRISSLRW 126
            ..:|..:.:.|  :....|.:...........|...::|......|...:.|...:....:|..|
 Worm    48 QAQCEAVGATLSGIQSANDAQVFQSLGLAALGGQSGSFWIGARRRAACQTQRITADCTAQNSFEW 112

  Fly   127 ARN-------------QPDNAGQKEHCIHL----------GYIYKDSRKFELNDRPCS------Q 162
            ..:             ||||:.....|..|          ..::..::   |:|..|.      .
 Worm   113 TDDTVTGTDGFVWNDKQPDNSDLNSGCAVLLASGPPVQWGNGMWAGAK---LDDHVCDFVDKTPA 174

  Fly   163 DPNSLFKYIC 172
            :|..:..|||
 Worm   175 NPRRIRGYIC 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 26/153 (17%)
clec-96NP_492869.1 CLECT 18..151 CDD:214480 26/151 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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