DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-129

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_494582.1 Gene:clec-129 / 189343 WormBaseID:WBGene00021145 Length:211 Species:Caenorhabditis elegans


Alignment Length:242 Identity:44/242 - (18%)
Similarity:64/242 - (26%) Gaps:107/242 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVI-----AKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTESLNW 60
            ||..|.|||::.:.     ....| :...:.|..|....|.          ..|:.||...|..|
 Worm     1 MLGKTALLISVCLALSAADCPAAW-KAILNSQAEESEDNGC----------EAGWKFFNRPSGGW 54

  Fly    61 ------------YEAYEKCRELNSELVTFETDQE------------------------------- 82
                        .:|.:.|:.:.|.|...:...|                               
 Worm    55 CMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARSSGSVWVGMQRTQKCLK 119

  Fly    83 ------FDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCI 141
                  ..|:|||...:||     .:|.|                 ...:..|||||....:.|.
 Worm   120 QPKSDTCSALTAFEYTDGS-----VTGTD-----------------GFIFQGNQPDNKELNQDCA 162

  Fly   142 HL-----------GYIYKDSRKFELNDRPCSQD-----PNSLFKYIC 172
            .|           |..|..:    |:|..|.:.     |..:..|||
 Worm   163 VLLASKAASVSTNGQFYAAT----LDDIMCDEQVDDNGPRVMRGYIC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 33/187 (18%)
clec-129NP_494582.1 CLECT 40..168 CDD:214480 25/159 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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