DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-183

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_501639.1 Gene:clec-183 / 188635 WormBaseID:WBGene00011855 Length:216 Species:Caenorhabditis elegans


Alignment Length:213 Identity:44/213 - (20%)
Similarity:79/213 - (37%) Gaps:59/213 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVIA--KTGWTREK--FSIQVNEGNTFGALVKAEPFT----------------- 44
            :|.:|:||..::.::  .|..||.|  .::.:||........||...|                 
 Worm     3 LLPVTLLLGAVIFVSTKSTCRTRTKPPSTVPMNEVTEAVTTKKASNVTVKPTTCEASWTRVERSI 67

  Fly    45 -----KINDGYYFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTAN----GSRLTYW 100
                 |:.:|:       ::..:|.:.|..:.:||...|:..| .||.|.|...    .|...:.
 Worm    68 GGWCLKVYNGF-------VHQDQASQACIRIGAELSGSESSAE-RAVIARLGKERMLAASDYKFG 124

  Fly   101 TSGNDLAK-TGSHRWF----TNAQRISSLRWARNQPD---NAGQKEHCIHLGYIY---------- 147
            |....:|: |.:..|.    .|......::|::.:|.   .:|...:|. |.:|:          
 Worm   125 TIRVGIARPTTTRAWALTDGNNDGGQQGIQWSKGEPQLGPTSGYSHNCA-LMWIWASTGTSPYEH 188

  Fly   148 -KDSRKF-ELNDRPCSQD 163
             |...|| .|..|.|::|
 Worm   189 GKYFHKFVHLLGRTCTED 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 29/137 (21%)
clec-183NP_501639.1 CLECT 70..180 CDD:153057 24/118 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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