DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-21

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_494002.2 Gene:clec-21 / 188250 WormBaseID:WBGene00020327 Length:421 Species:Caenorhabditis elegans


Alignment Length:181 Identity:40/181 - (22%)
Similarity:69/181 - (38%) Gaps:35/181 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TREKFSIQVNEGNTFGALVKAE----PF-----TKIND-------GY-YFFGTESLNWYEAYEKC 67
            :||...:.||....:....|.|    ||     |.|.|       || |...:|:.::..|.:.|
 Worm   122 SRETPCVTVNTTTGYWISTKYENGMYPFVCEMPTTIEDDCQNNYNGYCYIPHSEAKSFENAQKSC 186

  Fly    68 RELNSELVTFETDQE--FDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQRISSLRWARNQ 130
            .|....||:..:..|  :..:.|:....|.   |...|..:...|..||...:      ||:..:
 Worm   187 EEECGNLVSIHSANENLYLNILAYNFLPGE---YIYIGGMVQDFGFSRWTDGS------RWSYEK 242

  Fly   131 PDNAGQKEH--CIHLGYIYKDSRKF-ELNDRPCSQDPNSLFKYICEAPEME 178
            .|...::::  |:.:...::|.... :....||    |.:.:|.|:.|..|
 Worm   243 FDRILKRKNGECVVVAGDWEDVIPIDQWVTTPC----NRIRQYFCKRPAGE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 24/126 (19%)
clec-21NP_494002.2 CLECT 23..152 CDD:214480 8/29 (28%)
CLECT 165..284 CDD:214480 26/131 (20%)
CUB 307..408 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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