DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and clec-86

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_509202.1 Gene:clec-86 / 183775 WormBaseID:WBGene00016912 Length:166 Species:Caenorhabditis elegans


Alignment Length:88 Identity:18/88 - (20%)
Similarity:27/88 - (30%) Gaps:43/88 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRW-------FT 116
            ||.:          :|.....|.::|             .:|..|:|...|...||       ||
 Worm    66 NWIQ----------KLAVDNLDADYD-------------LFWIGGSDEGHTNDWRWTDGSVLNFT 107

  Fly   117 N-------------AQRISSLRW 126
            |             |.::|:.||
 Worm   108 NPGPGQPLEDRHCGAMQLSTGRW 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 18/88 (20%)
clec-86NP_509202.1 CLECT 20..144 CDD:214480 18/88 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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