DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-198

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_503091.3 Gene:clec-198 / 183598 WormBaseID:WBGene00008203 Length:499 Species:Caenorhabditis elegans


Alignment Length:177 Identity:31/177 - (17%)
Similarity:56/177 - (31%) Gaps:48/177 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TGWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTESLNWYEAYEKC--RELNSELVTFET 79
            :|||:                      :.:|...|...|....||.|.:.|  :...|.|.:..:
 Worm    87 SGWTK----------------------STVNGMCYKIATADTTWYAAEDWCYSQRYGSHLTSVHS 129

  Fly    80 DQEFDAVTAFLTANG--SRLTYWTSGNDLAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIH 142
            :.|...:.|...:.|  ..:..|..........::.| |:...:..|.|....|.:...::.|:.
 Worm   130 EAEAQWIAATYVSTGWFPYMDNWLGLRRSCDNSTYIW-TDGTPVDYLWWQPGYPGSGDPEKSCVT 193

  Fly   143 L----------GYIYKDSRKFE--------LNDRPCSQDPNSLFKYI 171
            :          ||:   ..:|:        |....|..||.|...:|
 Worm   194 IWVTSLLKLNPGYV---QGQFDDIWDCGTNLATPTCRYDPTSTAPHI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 27/143 (19%)
clec-198NP_503091.3 CLECT 85..198 CDD:214480 22/133 (17%)
CLECT 371..497 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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