DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and clec-199

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001255942.1 Gene:clec-199 / 183064 WormBaseID:WBGene00007820 Length:667 Species:Caenorhabditis elegans


Alignment Length:176 Identity:35/176 - (19%)
Similarity:61/176 - (34%) Gaps:57/176 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TGWTREKFSIQVNEGNTFGALVK--AEPFTKINDGYYFFGTESLNWYEAYEKC--RELNSELVTF 77
            :||||.       .||  |...|  |.|.              |:||.:.:.|  ::..:.|.:.
 Worm   101 SGWTRW-------TGN--GCCYKEMASPM--------------LSWYASEDWCYSQKAGAHLASV 142

  Fly    78 ETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHR------W-FTNAQRISSLRWARNQPDNAG 135
            .:..|.:.:      |.....:|:..:|.  .|..|      | :|:...:..|.|..|.|...|
 Worm   143 HSRAEAEWL------NYQYKLWWSKMDDW--IGLRRNCDNTAWAWTDGTPVDFLWWQPNYPIYGG 199

  Fly   136 QKEHCIHL--GYIYKDSRKF---ELND----------RPCSQDPNS 166
            .::.|..:  ..:.:....|   :::|          ..|..|||:
 Worm   200 IEDSCTAMWDSTVLRGMYDFYPGQMDDGRSCTGSVAWALCKYDPNT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 25/140 (18%)
clec-199NP_001255942.1 CLECT 99..210 CDD:214480 29/139 (21%)
CLECT 549..664 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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