DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and clec-83

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_500260.3 Gene:clec-83 / 177065 WormBaseID:WBGene00021879 Length:237 Species:Caenorhabditis elegans


Alignment Length:143 Identity:27/143 - (18%)
Similarity:45/143 - (31%) Gaps:42/143 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 INDGYYFFGTESLNWYEAYEKCRELNSELVTFET--DQEFDAVTAFLTANGSRLTYWTSGNDLAK 108
            |.|..|....:.|::.:|...|..:::.|....|  ...|.|.|.......|...:|...:..:.
 Worm    29 IGDLCYVVVNQQLSYQDAVGYCHGISTSLAVVHTTLQANFLASTIRTKTGTSDSLFWIGLSRASS 93

  Fly   109 TGSHRWFTNAQRISSLRWAR---NQP-DN---------------AGQKEHCIHLGYIYKDSRKFE 154
            :....|...    |.:.|:.   |.| ||               |||::...             
 Worm    94 SSRFTWDDG----SVMYWSNFDLNFPKDNNIVAESVINGKWRTLAGQQKLVF------------- 141

  Fly   155 LNDRPCSQDPNSL 167
                .||.:||::
 Worm   142 ----ACSYNPNNV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 25/138 (18%)
clec-83NP_500260.3 CLECT 22..143 CDD:214480 23/134 (17%)
PAP1 110..>236 CDD:369990 11/58 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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