DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Clec4d

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_034949.3 Gene:Clec4d / 17474 MGIID:1298389 Length:219 Species:Mus musculus


Alignment Length:173 Identity:38/173 - (21%)
Similarity:72/173 - (41%) Gaps:28/173 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WTREKFSIQVNEGNTFGALVKAEP---------------FTKINDGYYFFGTESLNWYEAYEKCR 68
            |||... :::::.:|....::.||               :.......||...::..|:|:...|.
Mouse    49 WTRGSV-VKLSDYHTRVTCIREEPQPGATGGTWTCCPVSWRAFQSNCYFPLNDNQTWHESERNCS 112

  Fly    69 ELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWFTNAQ-RISSLRWARNQPD 132
            .::|.|||..|:.|.:.||..|   ..|.:|:....|....|..:|..... ...::.|.:.: .
Mouse   113 GMSSHLVTINTEAEQNFVTQLL---DKRFSYFLGLADENVEGQWQWVDKTPFNPHTVFWEKGE-S 173

  Fly   133 NAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICEAP 175
            |...:|.|:.|.::::   |:..||.||..:    .:.||:.|
Mouse   174 NDFMEEDCVVLVHVHE---KWVWNDFPCHFE----VRRICKLP 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 30/122 (25%)
Clec4dNP_034949.3 CLECT_DC-SIGN_like 83..207 CDD:153060 30/134 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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