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Protein Alignment Lectin-galC1 and Reg3a
DIOPT Version :9
Sequence 1: | NP_001188845.1 |
Gene: | Lectin-galC1 / 35216 |
FlyBaseID: | FBgn0016675 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001139318.1 |
Gene: | Reg3a / 171162 |
RGDID: | 621401 |
Length: | 174 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 30/151 - (19%) |
Similarity: | 57/151 - (37%) |
Gaps: | 25/151 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 KAEPFTKI-----NDGY----YFFGTESLNWYEAYEKCRELNS-ELVTFETDQEFDAVTAFLTAN 93
||.|.|:. :..| |...|...:|::|...|::..| .||:..:..|...|::.:|..
Rat 30 KAVPSTRTSCPMGSKAYRSYCYTLVTTLKSWFQADLACQKRPSGHLVSILSGGEASFVSSLVTGR 94
Fly 94 -GSRLTYWTSGND-----LAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRK 152
.:....|...:| ....|...| :|:..::.|.| ...|.:...:.:| |.:...|..
Rat 95 VNNNQDIWIGLHDPTMGQQPNGGGWEW-SNSDVLNYLNW-DGDPSSTVNRGNC---GSLTATSEF 154
Fly 153 FELNDRPCSQDPNSLFKYICE 173
.:..|..|..: ..::|:
Rat 155 LKWGDHHCDVE----LPFVCK 171
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Lectin-galC1 | NP_001188845.1 |
CLECT |
51..173 |
CDD:153057 |
24/128 (19%) |
Reg3a | NP_001139318.1 |
CLECT |
39..172 |
CDD:295302 |
26/142 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
50 |
1.000 |
Domainoid score |
I11353 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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